LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-940


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Filters

Gene
miRNA
Score
DIANA Links
chr22-38_28785274-29006793.1
hsa-miR-940
1.000
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623644
Biotype: lincRNA
Gene id: ENSG00000279978
Gene Name: chr22-38_28785274-29006793.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-940
Sequence: aaggcagggcccccgcucccc
MirBase ID: MIMAT0004983
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
123895-123915
0.023
11
8mer
9251-9266
0.014
2
9mer
52341-52364
0.011
1
8mer
166829-166850
0.010
8
8mer
217709-217731
0.009
1
8mer
252317-252342
0.009
0
8mer
71840-71846
0.009
1
8mer
54821-54842
0.008
1
7mer
65552-65578
0.008
0
8mer
200041-200048
0.008
1
7mer
43593-43615
0.008
5
8mer
254059-254065
0.008
1
7mer
126786-126794
0.008
8
8mer
203194-203216
0.007
1
8mer
138303-138326
0.007
0
8mer
49033-49055
0.006
1
7mer
157459-157480
0.006
1
7mer
41665-41670
0.006
1
8mer
35298-35323
0.006
0
7mer
93647-93652
0.006
5
6mer
436-457
0.006
2
7mer
29699-29712
0.005
1
7mer
238939-238944
0.005
0
9mer
223938-223963
0.005
1
8mer
22751-22769
0.005
1
8mer
203329-203351
0.005
0
8mer
6186-6201
0.005
1
7mer
75901-75926
0.005
4
7mer
169445-169465
0.005
1
8mer
148142-148152
0.004
2
8mer+wobble
46030-46052
0.004
1
7mer
98872-98892
0.004
1
7mer
136454-136475
0.004
1
7mer
170016-170030
0.004
1
7mer
160867-160888
0.004
0
7mer
194386-194407
0.004
1
7mer
17738-17759
0.004
1
7mer
33386-33412
0.004
6
7mer
94144-94150
0.004
3
7mer
133762-133782
0.004
1
7mer
105469-105490
0.004
1
7mer
24933-24955
0.004
1
7mer
42874-42893
0.004
1
7mer
196817-196824
0.004
1
7mer
77651-77671
0.004
0
7mer
261256-261271
0.004
1
7mer
228712-228733
0.004
1
7mer
210935-210952
0.004
Not Conserved
7mer
64080-64101
0.004
1
7mer
182965-182992
0.004
1
7mer
263631-263645
0.004
Not Conserved
7mer
138658-138679
0.004
0
7mer
94876-94896
0.004
1
6mer
131600-131605
0.004
7
7mer
97142-97163
0.003
1
8mer
118962-118969
0.003
0
7mer
130918-130939
0.003
1
7mer
48331-48338
0.003
0
7mer
176114-176135
0.003
1
7mer
201773-201787
0.003
Not Conserved
7mer
127688-127708
0.003
0
7mer
133337-133344
0.003
2
7mer
73875-73894
0.003
5
7mer
108847-108873
0.003
1
8mer
202736-202742
0.003
Not Conserved
7mer
164517-164538
0.003
0
7mer
79800-79821
0.003
1
7mer
134747-134768
0.003
1
7mer
110074-110094
0.003
1
7mer
54966-54979
0.003
1
7mer
71372-71386
0.003
0
7mer
147243-147264
0.003
0
7mer
137975-137996
0.003
0
7mer
258013-258028
0.003
1
7mer
43406-43432
0.003
1
8mer
139982-139997
0.003
1
7mer
76107-76128
0.003
0
7mer
112668-112689
0.003
0
6mer
186421-186425
0.003
5
8mer
70826-70839
0.003
1
8mer
174185-174206
0.003
1
7mer
214710-214727
0.003
1
7mer
218347-218368
0.003
1
6mer
208802-208814
0.003
7
8mer
159321-159327
0.003
0
7mer
99176-99183
0.003
1
7mer
247408-247430
0.003
0
8mer
243802-243817
0.003
0
7mer
253841-253855
0.003
0
7mer
227231-227252
0.003
1
7mer
196262-196269
0.003
3
8mer
224173-224184
0.003
1
7mer
183182-183195
0.003
5
7mer
219056-219077
0.003
1
7mer
90690-90711
0.003
0
7mer
124569-124578
0.003
2
6mer
125603-125630
0.003
6
7mer
182281-182292
0.003
1
7mer
208228-208244
0.003
Not Conserved
7mer
18058-18080
0.003
Not Conserved
6mer
187682-187686
0.003
0
7mer
2210-2225
0.003
1
6mer
167660-167676
0.003
2
9mer
195380-195390
0.003
0
6mer
13099-13117
0.003
7
9mer
116255-116271
0.003
1
7mer
49498-49512
0.002
5
7mer
108275-108296
0.002
Not Conserved
7mer
150970-150975
0.002
0
7mer
5443-5460
0.002
1
7mer
236159-236173
0.002
0
7mer
125995-126016
0.002
0
6mer
62027-62036
0.002
1
8mer
119910-119934
0.002
5
7mer
249556-249574
0.002
0
7mer
216681-216705
0.002
0
7mer
54966-54983
0.002
1
6mer
46474-46500
0.002
2
6mer
249164-249169
0.002
Not Conserved
7mer
131720-131727
0.002
1
7mer
108366-108380
0.002
1
7mer
63714-63728
0.002
0
6mer
34697-34710
0.002
1
6mer
38126-38132
0.002
2
6mer
36045-36061
0.002
1
6mer
162344-162359
0.002
5
8mer
205957-205972
0.002
Not Conserved
6mer
123972-123990
0.002
9
6mer
175754-175763
0.002
1
7mer
117927-117943
0.002
1
7mer
177105-177113
0.002
1
6mer
22131-22155
0.002
7
7mer
161435-161444
0.002
1
6mer
226157-226161
0.002
3
8mer+wobble
149296-149310
0.002
4
7mer
111205-111215
0.002
0
8mer
228855-228870
0.002
0
6mer
114628-114646
0.002
7
6mer
210509-210518
0.002
3
6mer
169178-169182
0.002
0
7mer
70962-70983
0.002
0
7mer
204870-204888
0.002
1
7mer
86055-86081
0.002
0
6mer
74437-74457
0.002
4
6mer
176452-176467
0.002
1
6mer
47966-47981
0.002
1
6mer
26303-26321
0.002
2
7mer
194528-194542
0.002
1
8mer
133903-133918
0.002
0
6mer
198296-198300
0.002
0
6mer
55276-55291
0.002
3
6mer
258218-258223
0.002
1
7mer
7172-7196
0.002
0
6mer
149579-149595
0.002
1
7mer
154415-154430
0.002
3
6mer
136792-136805
0.002
1
6mer
12065-12089
0.002
4
6mer
143917-143938
0.002
3
6mer
226633-226640
0.002
1
6mer
61287-61304
0.002
2
6mer
178262-178282
0.002
2
6mer
160637-160641
0.002
2
6mer
74963-74978
0.002
5
6mer
164932-164948
0.002
2
7mer
183051-183073
0.002
1
6mer
172103-172112
0.001
2
6mer
15430-15444
0.001
1
6mer
9472-9492
0.001
4
6mer
218901-218915
0.001
1
6mer
235707-235726
0.001
3
9mer
215262-215278
0.001
1
6mer
125899-125907
0.001
0
7mer
255511-255525
0.001
1
6mer
209515-209536
0.001
0
7mer
43997-44010
0.001
0
6mer
50204-50209
0.001
0
6mer
87788-87810
0.001
1
6mer
30702-30711
0.001
2
7mer
227373-227387
0.001
1
6mer
115381-115404
0.001
0
6mer
95117-95132
0.001
1
6mer
94307-94325
0.001
1
6mer
145334-145355
0.001
0
6mer
255381-255401
0.001
1
6mer
87070-87091
0.001
1
7mer
159330-159338
0.001
1
6mer
243135-243154
0.001
0
6mer
263814-263828
0.001
1
6mer
53175-53196
0.001
1
6mer
134094-134113
0.001
1
8mer
215835-215858
0.001
1
7mer
177125-177138
0.001
1
6mer
84450-84457
0.001
0
6mer
200458-200476
0.001
1
6mer
90129-90149
0.001
0
6mer
2479-2502
0.001
1
7mer
177256-177269
0.001
0
7mer
252401-252415
0.001
3
7mer
18848-18869
0.001
0
6mer
80047-80063
0.001
0
7mer
247560-247565
0.001
0
6mer
148529-148554
0.001
0
6mer
226379-226392
0.001
1
7mer
136596-136610
0.001
0
6mer
207058-207074
0.001
0
6mer
84867-84882
0.001
1
9mer
156324-156347
0.001
1
6mer
52456-52482
0.001
1
7mer
84745-84757
0.001
1
7mer
247235-247240
0.001
Not Conserved
6mer
108681-108704
0.001
0
6mer
13741-13754
0.001
0
6mer
116413-116426
0.001
0
6mer
6586-6593
0.001
1
8mer
154333-154344
0.001
2
6mer
136245-136261
0.001
0
6mer
110853-110866
0.001
1
6mer
247084-247105
0.001
0
6mer
186162-186188
0.001
0
6mer
158173-158185
0.001
0
6mer
115197-115207
0.001
1
6mer
98565-98572
0.001
1
6mer
36773-36794
0.001
0
6mer
84646-84670
0.001
3
8mer+wobble
140534-140556
0.001
0
6mer
131160-131181
0.001
Not Conserved
6mer
233046-233071
0.001
1
8mer
43622-43631
0.001
2
6mer
209840-209856
0.001
0
6mer
80177-80191
0.001
0
7mer
133346-133353
0.001
0
6mer
239374-239401
0.001
1
6mer
57137-57157
0.001
1
6mer
224560-224579
0.001
1
6mer
90470-90480
0.001
4
6mer
95549-95567
0.001
1
6mer
18150-18173
0.001
1
6mer
53285-53309
0.001
1
6mer
213997-214013
0.001
2
6mer
194706-194731
0.001
Not Conserved
7mer
26354-26369
0.001
1
6mer
19013-19027
0.001
0
6mer
134186-134210
0.001
0
6mer
215740-215759
0.001
1
6mer
55000-55017
0.001
1
7mer
95549-95571
0.001
1
6mer
241720-241743
0.001
1
6mer
227896-227910
0.001
1
6mer
265316-265334
0.001
0
6mer
242855-242876
0.001
Not Conserved
6mer
74777-74790
0.001
2
6mer
112809-112822
0.001
0
6mer
222468-222486
0.001
2
6mer
140184-140195
0.001
2
6mer
138879-138902
0.001
1
6mer
76245-76257
0.001
0
6mer
227055-227072
0.001
1
7mer
76247-76261
0.001
0
7mer
90470-90484
0.000
1
6mer
239458-239468
0.000
0
6mer
242922-242943
0.000
0
6mer
207497-207521
0.000
0
6mer
70840-70860
0.000
Not Conserved
RP11-458F8.4
hsa-miR-940
1.000
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000610177
Biotype: lincRNA
Gene id: ENSG00000273142
Gene Name: RP11-458F8.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-940
Sequence: aaggcagggcccccgcucccc
MirBase ID: MIMAT0004983
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3395-3410
0.049
1
8mer
3045-3070
0.036
1
7mer
3267-3282
0.019
0
7mer
3112-3119
0.016
1
7mer
3235-3250
0.015
1
8mer
2801-2816
0.014
1
8mer
3197-3215
0.014
0
7mer
496-512
0.013
1
7mer
3363-3377
0.012
0
8mer
603-617
0.009
0
7mer
1246-1263
0.008
1
7mer
2823-2847
0.008
1
7mer
311-325
0.008
1
8mer
2363-2388
0.007
1
8mer
112-126
0.007
0
6mer
3125-3151
0.007
1
7mer
2929-2954
0.007
1
7mer
2989-3006
0.007
0
9mer
819-837
0.006
0
8mer
1015-1041
0.006
0
7mer
856-875
0.005
1
7mer
2315-2324
0.005
1
6mer
3241-3261
0.005
0
7mer
530-545
0.005
1
7mer
2242-2256
0.005
0
7mer
2578-2594
0.004
Not Conserved
7mer
2674-2688
0.004
0
7mer
1706-1730
0.003
1
7mer
2042-2069
0.003
0
7mer
1548-1564
0.003
1
7mer
924-943
0.003
1
7mer
1415-1430
0.003
1
7mer
965-975
0.002
0
7mer
1820-1825
0.002
0
6mer
2177-2193
0.002
0
7mer
1609-1634
0.002
1
6mer
2271-2288
0.001
0
7mer
2086-2101
0.001
0
7mer
1348-1362
0.001
0
7mer
1334-1355
0.001
Not Conserved
RP13-580B18.4
hsa-miR-940
1.000
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000624628
Biotype: lincRNA
Gene id: ENSG00000279072
Gene Name: RP13-580B18.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-940
Sequence: aaggcagggcccccgcucccc
MirBase ID: MIMAT0004983
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
110-120
0.016
0
8mer
23387-23404
0.009
Not Conserved
7mer
594-619
0.009
0
7mer
23770-23778
0.008
0
8mer
23262-23277
0.008
0
7mer
347-364
0.006
0
7mer
212-227
0.006
0
7mer
23356-23365
0.006
0
7mer
23168-23185
0.005
0
7mer
23579-23594
0.004
0
8mer
20371-20386
0.004
0
8mer
21035-21050
0.004
0
8mer
20682-20700
0.004
Not Conserved
7mer
19268-19282
0.004
0
7mer
19739-19752
0.004
0
8mer
22651-22666
0.004
0
7mer
22937-22951
0.003
0
7mer
1226-1243
0.003
Not Conserved
7mer
20151-20168
0.003
0
7mer
10646-10660
0.003
0
7mer
1577-1601
0.003
Not Conserved
7mer
19644-19650
0.003
0
7mer
21852-21867
0.003
Not Conserved
7mer
20848-20874
0.003
0
7mer
10282-10288
0.002
0
7mer
1959-1974
0.002
Not Conserved
7mer
19004-19019
0.002
0
7mer
18903-18920
0.002
0
8mer
6035-6049
0.002
0
7mer
18646-18670
0.002
0
7mer
3977-4001
0.002
0
7mer
3713-3728
0.002
0
6mer
22045-22050
0.002
0
7mer
5906-5930
0.002
0
7mer
4164-4188
0.002
0
7mer
8808-8822
0.002
Not Conserved
7mer
14475-14489
0.002
Not Conserved
7mer
6922-6936
0.002
Not Conserved
7mer
14798-14813
0.002
Not Conserved
6mer
23643-23658
0.002
Not Conserved
7mer
5132-5146
0.002
Not Conserved
7mer
12628-12642
0.002
Not Conserved
7mer
7509-7533
0.002
Not Conserved
8mer
1326-1342
0.002
Not Conserved
7mer
16217-16231
0.002
Not Conserved
7mer
3390-3404
0.002
Not Conserved
7mer
22620-22634
0.002
0
7mer
6558-6564
0.002
Not Conserved
7mer
8444-8450
0.002
Not Conserved
7mer
15853-15859
0.002
Not Conserved
7mer
18055-18069
0.002
Not Conserved
7mer
5455-5470
0.002
Not Conserved
7mer
9131-9146
0.002
Not Conserved
7mer
4768-4774
0.002
Not Conserved
6mer
23101-23124
0.002
0
7mer
2223-2236
0.002
Not Conserved
7mer
10969-10984
0.002
Not Conserved
8mer
4293-4307
0.002
0
7mer
14102-14108
0.002
Not Conserved
7mer
16540-16555
0.002
Not Conserved
7mer
7245-7260
0.002
Not Conserved
7mer
9395-9419
0.002
Not Conserved
8mer
8213-8228
0.002
Not Conserved
7mer
2473-2490
0.002
Not Conserved
8mer
6430-6447
0.002
0
7mer
16991-17015
0.002
Not Conserved
7mer
1830-1854
0.002
Not Conserved
8mer
15622-15637
0.002
Not Conserved
7mer
3029-3054
0.001
Not Conserved
7mer
21191-21217
0.001
0
6mer
21290-21314
0.001
1
8mer
2602-2616
0.001
Not Conserved
7mer
12264-12270
0.001
Not Conserved
7mer
12951-12966
0.001
Not Conserved
7mer
15062-15086
0.001
Not Conserved
6mer
22366-22381
0.001
0
7mer
11233-11257
0.001
Not Conserved
7mer
5719-5743
0.001
Not Conserved
7mer
13215-13239
0.001
Not Conserved
7mer
16804-16828
0.001
Not Conserved
7mer
22969-22981
0.001
0
8mer
10051-10066
0.001
Not Conserved
8mer
13871-13886
0.001
Not Conserved
8mer
2798-2813
0.001
Not Conserved
9mer
4536-4552
0.001
Not Conserved
7mer
9582-9606
0.001
Not Conserved
7mer
22270-22294
0.001
0
7mer
7696-7720
0.001
Not Conserved
7mer
22973-22981
0.001
Not Conserved
7mer
13402-13426
0.001
Not Conserved
8mer
6327-6342
0.001
Not Conserved
8mer
12033-12048
0.001
Not Conserved
7mer
21626-21640
0.001
Not Conserved
7mer
11420-11444
0.001
Not Conserved
8mer
13823-13845
0.001
0
8mer
15378-15392
0.001
Not Conserved
8mer
9711-9725
0.001
Not Conserved
8mer
2702-2725
0.001
Not Conserved
7mer
17691-17697
0.001
Not Conserved
8mer
17120-17134
0.001
Not Conserved
6mer
21689-21696
0.001
0
8mer
7825-7839
0.001
Not Conserved
8mer
11549-11563
0.001
Not Conserved
8mer
13531-13545
0.001
Not Conserved
8mer
17563-17579
0.001
Not Conserved
7mer
20340-20356
0.001
0
7mer
15249-15273
0.001
Not Conserved
8mer
17460-17475
0.001
Not Conserved
7mer
18468-18493
0.001
0
7mer
19454-19480
0.001
0
8mer
2901-2918
0.001
Not Conserved
8mer
12136-12153
0.001
Not Conserved
8mer
15725-15742
0.001
Not Conserved
8mer
10154-10171
0.001
Not Conserved
8mer
8316-8333
0.001
Not Conserved
8mer
8117-8139
0.001
Not Conserved
6mer
20469-20478
0.001
Not Conserved
8mer
4640-4657
0.001
Not Conserved
6mer
1115-1123
0.001
Not Conserved
6mer
21531-21554
0.001
Not Conserved
8mer
17412-17435
0.001
Not Conserved
8mer
8069-8091
0.001
Not Conserved
8mer
11985-12007
0.001
Not Conserved
8mer
8021-8044
0.001
Not Conserved
6mer
23069-23092
0.001
0
8mer
13974-13991
0.001
Not Conserved
8mer
13727-13746
0.001
Not Conserved
8mer
15574-15597
0.001
Not Conserved
8mer
19581-19597
0.001
0
8mer
6135-6157
0.001
Not Conserved
8mer
13679-13701
0.001
Not Conserved
8mer
9907-9929
0.001
Not Conserved
8mer
11697-11719
0.001
Not Conserved
8mer
17316-17338
0.001
Not Conserved
7mer
22266-22284
0.001
0
8mer
6183-6205
0.001
Not Conserved
6mer
22746-22761
0.001
Not Conserved
7mer
20614-20632
0.001
0
7mer
22234-22257
0.001
Not Conserved
8mer
11841-11863
0.001
Not Conserved
8mer
13631-13653
0.001
Not Conserved
8mer
11793-11815
0.001
Not Conserved
8mer
11937-11959
0.001
Not Conserved
8mer
10003-10025
0.001
Not Conserved
8mer
17364-17386
0.001
Not Conserved
8mer
8165-8187
0.001
Not Conserved
8mer
6279-6301
0.001
Not Conserved
8mer
4489-4511
0.001
Not Conserved
8mer
4441-4463
0.001
Not Conserved
8mer
9955-9977
0.001
Not Conserved
8mer
11745-11764
0.001
Not Conserved
8mer
13775-13794
0.001
Not Conserved
8mer
11649-11671
0.001
Not Conserved
8mer
11889-11911
0.001
Not Conserved
8mer
6231-6253
0.001
Not Conserved
6mer
20939-20954
0.001
0
8mer
17220-17242
0.001
Not Conserved
8mer
9859-9881
0.001
Not Conserved
8mer
15478-15501
0.001
Not Conserved
8mer
7973-7995
0.001
Not Conserved
8mer
9811-9833
0.001
Not Conserved
8mer
7925-7947
0.001
Not Conserved
8mer
17268-17290
0.001
Not Conserved
8mer
4393-4415
0.001
Not Conserved
8mer
15526-15548
0.001
Not Conserved
6mer
22715-22739
0.001
0
6mer
22558-22585
0.001
0
7mer
21286-21304
0.001
0
7mer
6426-6447
0.001
0
7mer
18382-18397
0.001
Not Conserved
6mer
20596-20608
0.001
0
6mer
22013-22027
0.001
0
6mer
21517-21533
0.001
Not Conserved
6mer
20328-20354
0.001
0
7mer
15721-15742
0.001
Not Conserved
7mer
10150-10171
0.001
Not Conserved
7mer
4636-4657
0.000
Not Conserved
6mer
20618-20644
0.000
0
7mer
12132-12153
0.000
Not Conserved
7mer
8312-8333
0.000
Not Conserved
7mer
2897-2918
0.000
Not Conserved
7mer
17559-17579
0.000
Not Conserved
9mer
21003-21020
0.000
Not Conserved
7mer
13970-13991
0.000
Not Conserved
6mer
2181-2186
0.000
Not Conserved
6mer
15312-15337
0.000
Not Conserved
8mer+wobble
2750-2773
0.000
Not Conserved
LINC01224
hsa-miR-940
1.000
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000596283
Biotype: lincRNA
Gene id: ENSG00000269416
Gene Name: LINC01224
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-940
Sequence: aaggcagggcccccgcucccc
MirBase ID: MIMAT0004983
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2614-2627
0.054
1
7mer
2696-2715
0.033
1
7mer
2441-2461
0.027
1
7mer
1032-1051
0.025
1
7mer
2357-2375
0.021
1
6mer
2625-2644
0.017
1
7mer
1631-1649
0.016
1
6mer
410-417
0.013
1
7mer
550-564
0.008
0
7mer
1846-1854
0.006
0
7mer
1252-1272
0.005
0
6mer
950-959
0.004
1
7mer
1447-1472
0.004
0
7mer
1371-1388
0.002
0
MIR4534
hsa-miR-940
1.000
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623111
Biotype: sense_overlapping
Gene id: ENSG00000279010
Gene Name: MIR4534
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-940
Sequence: aaggcagggcccccgcucccc
MirBase ID: MIMAT0004983
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
10800-10818
0.012
1
7mer
54468-54489
0.009
0
8mer
21294-21311
0.009
2
8mer
10537-10544
0.007
1
8mer
49178-49185
0.006
1
7mer
3913-3938
0.006
1
8mer
38767-38794
0.005
Not Conserved
7mer
8936-8949
0.005
1
8mer
37036-37056
0.004
1
7mer
1580-1601
0.004
1
7mer
1855-1876
0.004
1
7mer
49007-49023
0.004
0
8mer
5745-5768
0.004
0
7mer
26095-26116
0.004
2
7mer
14875-14889
0.004
0
7mer
6044-6066
0.004
1
8mer
24522-24549
0.004
1
7mer
12940-12954
0.004
0
7mer
19646-19666
0.004
7
7mer
14432-14454
0.004
0
7mer
53276-53296
0.004
0
7mer
7832-7853
0.004
1
7mer
11688-11702
0.003
1
7mer
9931-9952
0.003
0
7mer
3558-3579
0.003
0
8mer
10056-10077
0.003
1
7mer
27311-27336
0.003
2
7mer
44138-44158
0.003
0
8mer
21038-21053
0.003
1
7mer
12592-12612
0.003
0
8mer
24402-24413
0.003
3
8mer
1677-1699
0.003
0
8mer
36669-36684
0.003
1
8mer
16457-16472
0.003
0
7mer
30847-30861
0.003
0
7mer
43003-43017
0.003
1
7mer
41456-41473
0.003
0
8mer
22687-22709
0.003
0
7mer
29063-29084
0.003
1
7mer
18627-18632
0.002
4
7mer
49934-49947
0.002
2
7mer
26713-26718
0.002
2
7mer
19944-19966
0.002
3
8mer
11947-11961
0.002
Not Conserved
6mer
9376-9385
0.002
1
7mer
8560-8577
0.002
1
9mer
43345-43360
0.002
0
6mer
41084-41101
0.002
1
7mer
26371-26390
0.002
1
6mer
34564-34583
0.002
6
8mer
12734-12748
0.002
0
6mer
10251-10261
0.002
2
7mer
25760-25787
0.002
7
8mer
52323-52345
0.002
2
7mer
11966-11987
0.002
1
6mer
33924-33938
0.002
2
7mer
38275-38290
0.002
1
8mer
30670-30676
0.002
Not Conserved
6mer
36504-36521
0.002
3
6mer
18480-18506
0.002
1
6mer
42011-42036
0.001
6
7mer
5291-5304
0.001
0
7mer
12147-12161
0.001
0
8mer
39169-39195
0.001
1
7mer
26237-26251
0.001
1
6mer
51599-51603
0.001
2
6mer
30357-30371
0.001
1
6mer
8740-8747
0.001
1
6mer
39006-39030
0.001
3
6mer
32974-33000
0.001
1
6mer
1341-1353
0.001
0
7mer
37938-37943
0.001
4
6mer
12128-12135
0.001
0
6mer
42361-42384
0.001
3
6mer
37919-37935
0.001
2
6mer
8250-8266
0.001
0
6mer
35061-35086
0.001
0
6mer
18144-18163
0.001
Not Conserved
6mer
27178-27193
0.001
1
6mer
14575-14584
0.001
Not Conserved
6mer
3203-3221
0.001
1
6mer
26975-26994
0.001
0
7mer
37925-37939
0.001
1
6mer
18666-18689
0.001
1
6mer
3277-3286
0.001
0
7mer
14575-14588
0.000
Not Conserved
6mer
39028-39043
0.000
1
6mer
48741-48757
0.000
0
6mer
31186-31208
0.000
0
XLOC_000008
hsa-miR-940
1.000
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00001909
Biotype: transcript isomorph
Gene id: XLOC_000008
Gene Name: XLOC_000008
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-940
Sequence: aaggcagggcccccgcucccc
MirBase ID: MIMAT0004983
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
74-79
0.023
Not Conserved
7mer
1085-1090
0.015
0
7mer
1161-1166
0.013
0
7mer
39-44
0.012
Not Conserved
7mer
284-289
0.011
0
7mer
1371-1376
0.011
0
7mer
424-429
0.010
0
7mer
1231-1236
0.009
0
7mer
1196-1201
0.009
Not Conserved
7mer
913-918
0.009
Not Conserved
7mer
599-604
0.008
0
7mer
389-394
0.008
Not Conserved
7mer
864-883
0.007
0
7mer
529-534
0.006
Not Conserved
7mer
1336-1341
0.006
Not Conserved
7mer
144-149
0.006
Not Conserved
7mer
1266-1271
0.005
Not Conserved
6mer
1276-1302
0.004
0
7mer
983-988
0.004
Not Conserved
7mer
739-744
0.003
Not Conserved
7mer
214-219
0.003
Not Conserved
6mer
670-674
0.003
0
6mer
190-215
0.002
Not Conserved
XLOC_013274
hsa-miR-940
1.000
mTTBlnEmP

Gene Details
Chromosome: chr19
Transcript: TCONS_00027238
Biotype: transcript isomorph
Gene id: XLOC_013274
Gene Name: XLOC_013274
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
A549 Lung Cancer/Malignant
- Lymph Node Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-940
Sequence: aaggcagggcccccgcucccc
MirBase ID: MIMAT0004983
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
5820-5826
0.030
1
7mer
241-255
0.029
1
8mer
1546-1566
0.024
1
7mer
3826-3847
0.018
1
7mer
5457-5471
0.015
1
7mer
5023-5037
0.011
1
7mer
3374-3396
0.011
1
7mer
5306-5330
0.009
1
7mer
2731-2750
0.006
0
6mer
1185-1204
0.005
1
7mer
5960-5974
0.004
0
6mer
1114-1133
0.004
1
6mer
5964-5976
0.003
0
6mer
4952-4968
0.003
1
7mer
3300-3317
0.002
0
TTTY15
hsa-miR-940
1.000
mTTBlnEmP

Gene Details
Chromosome: Y
Transcript: NR_001545.2
Biotype: lincRNA
Gene id: NR_001545.2 (gene)
Gene Name: TTTY15
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-940
Sequence: aaggcagggcccccgcucccc
MirBase ID: MIMAT0004983
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
582-600
0.051
0
8mer
1084-1097
0.042
0
7mer
240-262
0.028
0
9mer
1112-1119
0.019
0
6mer
114-137
0.017
0
7mer
4240-4264
0.014
0
TTTY15
hsa-miR-940
1.000
mTTBlnEmP

Gene Details
Chromosome: Y
Transcript: ENST00000417071
Biotype: lincRNA
Gene id: ENSG00000233864
Gene Name: TTTY15
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-940
Sequence: aaggcagggcccccgcucccc
MirBase ID: MIMAT0004983
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
693-706
0.082
0
9mer
721-728
0.053
0
7mer
70-92
0.033
0
TTTY15
hsa-miR-940
1.000
mTTBlnEmP

Gene Details
Chromosome: Y
Transcript: ENST00000440408
Biotype: lincRNA
Gene id: ENSG00000233864
Gene Name: TTTY15
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-940
Sequence: aaggcagggcccccgcucccc
MirBase ID: MIMAT0004983
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
615-633
0.050
0
8mer
1117-1130
0.041
0
7mer
273-295
0.027
0
9mer
1145-1152
0.019
0
6mer
147-170
0.017
0
7mer
4273-4297
0.014
0
XLOC_008295
hsa-miR-940
1.000
mTTBlnEmP

Gene Details
Chromosome: chrY
Transcript: TCONS_00017578
Biotype: transcript isomorph
Gene id: XLOC_008295
Gene Name: XLOC_008295
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
HUVEC Blood Vessel Normal/Primary
- Brain Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
- Liver Normal/Primary
A549 Lung Cancer/Malignant
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-940
Sequence: aaggcagggcccccgcucccc
MirBase ID: MIMAT0004983
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
615-633
0.050
0
8mer
1117-1130
0.041
0
7mer
273-295
0.027
0
9mer
1145-1152
0.019
0
6mer
147-170
0.017
0
7mer
4273-4297
0.014
0
XLOC_013174
hsa-miR-940
1.000
mTTBlnEmP

Gene Details
Chromosome: chr19
Transcript: TCONS_00027635
Biotype: transcript isomorph
Gene id: XLOC_013174
Gene Name: XLOC_013174
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
- Liver Normal/Primary
HepG2 Liver Cancer/Malignant
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
A549 Lung Cancer/Malignant
- Lymph Node Normal/Primary
HMEpC Mammary Gland Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-940
Sequence: aaggcagggcccccgcucccc
MirBase ID: MIMAT0004983
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
44-59
0.055
0
8mer
1330-1343
0.054
0
6mer
915-921
0.014
0
6mer
658-664
0.013
0
LINC00293
hsa-miR-940
0.999
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: NR_027012.1
Biotype: lincRNA
Gene id: NR_027012.1 (gene)
Gene Name: LINC00293
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-940
Sequence: aaggcagggcccccgcucccc
MirBase ID: MIMAT0004983
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
871-886
0.050
1
7mer
1415-1439
0.027
1
8mer
1061-1076
0.024
1
7mer
1578-1584
0.019
1
7mer
927-951
0.008
1
6mer
1712-1725
0.006
0
XIST
hsa-miR-940
0.999
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000429829
Biotype: lincRNA
Gene id: ENSG00000229807
Gene Name: XIST
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
Fibroblasts Lung Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
- Lymph Node Normal/Primary
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-940
Sequence: aaggcagggcccccgcucccc
MirBase ID: MIMAT0004983
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
18836-18855
0.081
4
8mer
978-990
0.013
0
8mer
17062-17086
0.006
1
8mer
6601-6626
0.006
1
7mer
16484-16497
0.004
2
6mer
1361-1365
0.004
3
6mer
2680-2694
0.003
4
6mer
7222-7232
0.003
2
6mer
6869-6875
0.002
2
6mer
13540-13548
0.002
1
6mer
17382-17389
0.002
1
6mer
8145-8159
0.002
2
6mer
15422-15447
0.002
Not Conserved
6mer
15647-15666
0.002
1
6mer
1770-1795
0.001
2
7mer
16480-16485
0.001
0
RP11-157B13.7
hsa-miR-940
0.999
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000599810
Biotype: lincRNA
Gene id: ENSG00000267872
Gene Name: RP11-157B13.7
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-940
Sequence: aaggcagggcccccgcucccc
MirBase ID: MIMAT0004983
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
324-339
0.049
0
7mer
243-257
0.044
0
7mer
35-52
0.027
0
7mer
2048-2068
0.008
Not Conserved
6mer
1476-1497
0.002
Not Conserved
6mer
1334-1353
0.002
Not Conserved
LINC01061
hsa-miR-940
0.999
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: NR_037596.1
Biotype: lincRNA
Gene id: NR_037596.1 (gene)
Gene Name: LINC01061
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-940
Sequence: aaggcagggcccccgcucccc
MirBase ID: MIMAT0004983
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
323-333
0.015
0
8mer
1965-1978
0.014
1
8mer
3264-3279
0.009
1
7mer
431-442
0.009
1
8mer
2911-2929
0.007
0
6mer
4482-4493
0.007
1
7mer
566-583
0.006
0
7mer
4418-4433
0.006
0
7mer
926-940
0.006
Not Conserved
8mer
2600-2618
0.004
0
7mer
1152-1161
0.004
0
6mer
4259-4264
0.003
Not Conserved
7mer
3077-3102
0.003
0
7mer
2698-2707
0.003
0
7mer
2380-2397
0.003
0
6mer
3904-3911
0.003
0
8mer
1807-1821
0.003
0
7mer
1870-1885
0.002
0
7mer
1366-1383
0.002
0
6mer
3746-3769
0.002
0
7mer
1495-1509
0.002
0
7mer
3420-3446
0.002
0
7mer
1253-1268
0.002
0
7mer
3841-3856
0.002
Not Conserved
8mer
3232-3249
0.001
0
7mer
2569-2585
0.001
0
6mer
3537-3546
0.001
Not Conserved
6mer
4227-4241
0.001
Not Conserved
7mer
3515-3533
0.001
Not Conserved
7mer
2843-2861
0.001
0
6mer
3168-3183
0.001
0
6mer
2557-2583
0.001
0
6mer
2825-2837
0.001
0
6mer
2847-2873
0.001
0
XLOC_006130
hsa-miR-940
0.999
mTTBlnEmP

Gene Details
Chromosome: chr7
Transcript: TCONS_00013484
Biotype: transcript isomorph
Gene id: XLOC_006130
Gene Name: XLOC_006130
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Lung Normal/Primary
- Ovary Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-940
Sequence: aaggcagggcccccgcucccc
MirBase ID: MIMAT0004983
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
158-171
0.067
1
7mer
21-38
0.062
1
AC006548.28
hsa-miR-940
0.999
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623130
Biotype: sense_overlapping
Gene id: ENSG00000280156
Gene Name: AC006548.28
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-940
Sequence: aaggcagggcccccgcucccc
MirBase ID: MIMAT0004983
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
27867-27874
0.007
1
8mer
32699-32711
0.005
1
7mer
78198-78204
0.005
0
8mer
36147-36169
0.004
1
7mer
82886-82907
0.004
1
7mer
36607-36633
0.004
1
8mer
6316-6338
0.004
1
7mer
76962-76969
0.004
0
9mer
65207-65227
0.004
0
7mer
74590-74595
0.004
0
9mer
5028-5043
0.003
1
7mer
65475-65487
0.003
1
8mer
60189-60215
0.003
0
8mer
75654-75669
0.003
0
7mer
51690-51704
0.003
Not Conserved
7mer
71900-71926
0.003
0
7mer
39309-39335
0.003
0
7mer
11879-11896
0.003
0
7mer
9015-9036
0.003
Not Conserved
7mer
16866-16873
0.003
0
7mer
72146-72167
0.003
Not Conserved
7mer
19386-19400
0.003
0
6mer
28444-28468
0.002
1
7mer
24302-24315
0.002
1
6mer
23017-23040
0.002
2
7mer
17266-17286
0.002
0
6mer
59950-59966
0.002
1
6mer
72476-72496
0.002
Not Conserved
6mer
53176-53181
0.002
Not Conserved
7mer
4182-4191
0.002
0
6mer
71635-71646
0.002
0
6mer
2353-2375
0.002
2
6mer
73755-73778
0.002
1
6mer
74832-74847
0.002
0
6mer
26316-26322
0.002
1
6mer
38136-38146
0.001
1
6mer
1340-1363
0.001
0
6mer
18096-18105
0.001
3
6mer
8140-8167
0.001
1
6mer
68972-68989
0.001
0
7mer
20169-20192
0.001
1
6mer
20883-20900
0.001
1
7mer
17102-17122
0.001
1
6mer
3683-3705
0.001
1
7mer
17184-17204
0.001
0
6mer
59672-59687
0.001
1
6mer
13448-13459
0.001
1
6mer
45534-45549
0.001
Not Conserved
6mer
12492-12512
0.001
1
7mer
39869-39896
0.001
1
6mer
35864-35883
0.001
1
6mer
36005-36029
0.001
0
6mer
3657-3675
0.001
1
6mer
9347-9365
0.001
1
6mer
7730-7748
0.000
1
6mer
59634-59659
0.000
0
6mer
59933-59941
0.000
1
6mer
17260-17279
0.000
0
8mer+mismatch
5948-5967
0.000
1
6mer
17178-17197
0.000
0
6mer
17096-17122
0.000
0
RP11-15H20.6
hsa-miR-940
0.999
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000601239
Biotype: retained_intron
Gene id: ENSG00000213971
Gene Name: RP11-15H20.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-940
Sequence: aaggcagggcccccgcucccc
MirBase ID: MIMAT0004983
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2523-2537
0.031
1
8mer
383-399
0.029
0
7mer
1326-1347
0.020
1
7mer
874-896
0.017
1
6mer
2452-2468
0.014
1
6mer
264-268
0.013
1
7mer
800-817
0.004
0
KCNQ1OT1
hsa-miR-940
0.999
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000597346
Biotype: antisense
Gene id: ENSG00000269821
Gene Name: KCNQ1OT1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HepG2 Liver Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-940
Sequence: aaggcagggcccccgcucccc
MirBase ID: MIMAT0004983
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
79770-79782
0.006
3
8mer
83409-83432
0.005
1
7mer
9879-9886
0.004
1
8mer
54990-54999
0.004
1
7mer
85500-85527
0.004
1
8mer
55867-55883
0.004
1
8mer
86092-86102
0.003
0
7mer
19468-19474
0.003
1
7mer
55057-55078
0.003
1
6mer
45302-45306
0.003
3
7mer
3328-3350
0.003
1
6mer
86396-86403
0.003
3
7mer
47002-47010
0.003
4
7mer
39781-39802
0.003
Not Conserved
6mer
68195-68205
0.003
3
6mer
75884-75906
0.003
3
6mer
90002-90017
0.002
3
7mer
70508-70524
0.002
1
6mer
40801-40807
0.002
1
7mer
62341-62352
0.002
1
6mer
56455-56465
0.002
3
8mer
38205-38211
0.002
0
6mer
89803-89807
0.002
4
7mer
77421-77436
0.002
2
6mer
56875-56891
0.002
3
6mer
63599-63611
0.002
2
6mer
23230-23247
0.002
1
7mer
37120-37139
0.002
0
7mer
46433-46452
0.002
1
6mer
60095-60120
0.002
2
6mer
33720-33740
0.002
0
6mer
49019-49032
0.002
1
6mer
61750-61756
0.002
1
6mer
47108-47132
0.002
1
6mer
59908-59912
0.002
1
6mer
13671-13695
0.002
1
6mer
88802-88820
0.001
1
6mer
47314-47322
0.001
1
6mer
37245-37265
0.001
0
6mer
75417-75440
0.001
1
6mer
46100-46119
0.001
1
6mer
84538-84549
0.001
1
6mer
37615-37640
0.001
0
6mer
90260-90274
0.001
0
7mer
57964-57990
0.001
1
6mer
64789-64815
0.001
1
6mer
63358-63370
0.001
1
6mer
63115-63131
0.001
0
6mer
73073-73092
0.001
1
6mer
46594-46618
0.001
1
7mer
31501-31518
0.001
0
7mer
84390-84405
0.001
1
7mer
55752-55768
0.001
0
6mer
84727-84743
0.001
Not Conserved
8mer
39654-39669
0.001
0
6mer
25683-25703
0.001
0
6mer
81751-81773
0.001
1
6mer
28426-28446
0.001
0
6mer
31349-31364
0.001
0
7mer
31497-31518
0.001
0
6mer
85485-85492
0.001
0
6mer
83386-83403
0.000
2
6mer
63564-63587
0.000
2
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